In [1]:
# jLM CME Imports
from jLM.CME import CMESimulation
from jLM.units import *
from jLM.LMLogger import *
from jLM.CMEPostProcessing import *
In [2]:
outputFile = "bimolConc.lm"
In [3]:
import logging
import os
setLMLoggerLevel(logging.INFO)
In [4]:
# Create our CME simulation object
# In order to specify concentrations of particles
# instead of particle numbers, you must specify
# the volume of the cell in terms Liters
sim = CMESimulation(1e-15) # E. coli cell size
In [5]:
# Define our chemical species
species = ['A', 'B', 'C']
sim.defineSpecies(species)
In [6]:
# Add reactions to the simulation
sim.addReaction(reactant=('A','B'), product='C', rate=1.07e5) # /M/s
sim.addReaction(reactant='C', product=('A','B'), rate=3.51e-1) # /s
In [7]:
# Set our initial species counts
# Here we specify a concentration in units of Molar
sim.addConcentration(species='A', conc=1.66e-6)
sim.addConcentration(species='B', conc=1.66e-6)
sim.addParticles(species='C', count=0)
In [8]:
# Define simulation parameters: run for 10 seconds, saving data every ms
sim.setWriteInterval(ms(1))
sim.setSimulationTime(10)
os.system("rm -rf %s"%(outputFile))
sim.save(outputFile)
In [9]:
# Run 50 replicates using the Gillespie solver
sim.run(outputFile, method="lm::cme::GillespieDSolver", replicates=50)
0%| | 0/50 [00:00<?, ?it/s]
2025-09-02 15:31:35) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:35) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:35) Info: Data output thread running. 2025-09-02 15:31:35) Info: Seeding xorwow rng with top word 1 and bottom word 877579624 2025-09-02 15:31:35) Info: Data output thread finished. 2025-09-02 15:31:35) Info: Simulation file closed.
2%|2 | 1/50 [00:00<00:12, 3.88it/s]
2025-09-02 15:31:35) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:35) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:35) Info: Data output thread running. 2025-09-02 15:31:35) Info: Seeding xorwow rng with top word 2 and bottom word 941544546 2025-09-02 15:31:35) Info: Data output thread finished. 2025-09-02 15:31:35) Info: Simulation file closed. 2025-09-02 15:31:35) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:35) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:35) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 3 and bottom word 997788648 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
6%|6 | 3/50 [00:00<00:05, 9.16it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 4 and bottom word 55750759 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 5 and bottom word 112533851 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
10%|# | 5/50 [00:00<00:03, 12.14it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 6 and bottom word 169576153 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 7 and bottom word 227329374 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
14%|#4 | 7/50 [00:00<00:03, 13.96it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 8 and bottom word 283624596 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 9 and bottom word 338261258 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
18%|#8 | 9/50 [00:00<00:02, 15.25it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 10 and bottom word 394716970 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 11 and bottom word 449596981 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
22%|##2 | 11/50 [00:00<00:02, 16.17it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 12 and bottom word 504190433 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 13 and bottom word 559328195 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
26%|##6 | 13/50 [00:00<00:02, 16.77it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 14 and bottom word 614802176 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 15 and bottom word 669639558 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
30%|### | 15/50 [00:01<00:02, 17.19it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 16 and bottom word 724915020 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 17 and bottom word 780259261 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
34%|###4 | 17/50 [00:01<00:01, 17.40it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 18 and bottom word 836837223 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 19 and bottom word 891708065 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed.
38%|###8 | 19/50 [00:01<00:01, 17.61it/s]
2025-09-02 15:31:36) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:36) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:36) Info: Data output thread running. 2025-09-02 15:31:36) Info: Seeding xorwow rng with top word 20 and bottom word 947281626 2025-09-02 15:31:36) Info: Data output thread finished. 2025-09-02 15:31:36) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 21 and bottom word 3098148 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
42%|####2 | 21/50 [00:01<00:01, 17.75it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 22 and bottom word 58008650 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 23 and bottom word 113732701 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
46%|####6 | 23/50 [00:01<00:01, 17.82it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 24 and bottom word 169309503 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 25 and bottom word 224415115 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
50%|##### | 25/50 [00:01<00:01, 17.91it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 26 and bottom word 279521046 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 27 and bottom word 335593388 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
54%|#####4 | 27/50 [00:01<00:01, 17.91it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 28 and bottom word 391427040 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 29 and bottom word 446856131 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
58%|#####8 | 29/50 [00:01<00:01, 17.94it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 30 and bottom word 502895053 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 31 and bottom word 557830845 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
62%|######2 | 31/50 [00:01<00:01, 17.95it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 32 and bottom word 613837476 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 33 and bottom word 669798888 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
66%|######6 | 33/50 [00:02<00:00, 17.90it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 34 and bottom word 726278620 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 35 and bottom word 782690482 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
70%|####### | 35/50 [00:02<00:00, 17.84it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 36 and bottom word 839225813 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 37 and bottom word 895472205 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed.
74%|#######4 | 37/50 [00:02<00:00, 17.78it/s]
2025-09-02 15:31:37) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:37) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:37) Info: Data output thread running. 2025-09-02 15:31:37) Info: Seeding xorwow rng with top word 38 and bottom word 952573817 2025-09-02 15:31:37) Info: Data output thread finished. 2025-09-02 15:31:37) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 39 and bottom word 7751418 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
78%|#######8 | 39/50 [00:02<00:00, 17.79it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 40 and bottom word 64777740 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 41 and bottom word 120497932 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
82%|########2 | 41/50 [00:02<00:00, 17.83it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 42 and bottom word 176528403 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 43 and bottom word 232269095 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
86%|########6 | 43/50 [00:02<00:00, 17.85it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 44 and bottom word 288305416 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 45 and bottom word 343968758 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
90%|######### | 45/50 [00:02<00:00, 17.85it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 46 and bottom word 400249380 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 47 and bottom word 456483092 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
94%|#########3| 47/50 [00:02<00:00, 17.81it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 48 and bottom word 513175743 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed. 2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 49 and bottom word 569897485 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
98%|#########8| 49/50 [00:02<00:00, 17.74it/s]
2025-09-02 15:31:38) Info: Using 32 processor(s) and 1 CUDA device(s) per process. 2025-09-02 15:31:38) Info: Assigning 1.00 processor(s) and 1.00 CUDA device(s) per replicate. 2025-09-02 15:31:38) Info: Data output thread running. 2025-09-02 15:31:38) Info: Seeding xorwow rng with top word 50 and bottom word 626841167 2025-09-02 15:31:38) Info: Data output thread finished. 2025-09-02 15:31:38) Info: Simulation file closed.
100%|##########| 50/50 [00:03<00:00, 16.66it/s]